Hotels in Mission Bay, San Diego

Search and compare San Diego, Mission Bay hotels from hundreds of travel sites on HotelsCombined and save.

...and more

Learn why travellers love HotelsCombined

Compare hotel ratings collected from thousands of user reviews.

One search gives you accurate pricing on affordable hotels.

Customie your results by hotel chain, amenities, price and more.

Search for hotels as many times as you want – for free.

Travel insights for hotels in San Diego

Use these up-to-date, data-driven insights about booking a hotel in San Diego including ideal times to book, pricing trends, and more.

What is the cheapest month to book a hotel in Mission Bay?

The cheapest month to book a hotel in Mission Bay is May (€74). Conversely, the most expensive month to stay in Mission Bay is July (€2,635).

What is the cheapest day to stay in a hotel in Mission Bay?

The cheapest day to stay in Mission Bay is Sunday (€235). On the other hand, travelers can expect to pay the most on Friday, when the average nightly price is €313.

How much is a hotel in Mission Bay tonight?

Users have found prices for hotels in Mission Bay tonight starting as low as €151, rising to an average cost of €209, based on searches in the last 72 hours. Prices start from €158 for a 4-star hotel in Mission Bay for tonight.

How much is a Mission Bay hotel room this weekend?

In the past 72 hours, we’ve seen prices for hotels in Mission Bay this weekend for as little as €230/night. If you’re specifically looking for a 3-star hotel this weekend, our users have found prices as low as €230/night. For a 4-star hotel in Mission Bay, the cheapest rate recently found was €242/night for this weekend.

Cheapest hotels in Mission Bay, San Diego

Discover affordable stays in Mission Bay that provide a quality experience without breaking the bank. Hotels in Mission Bay can be found for as low as €158 per night. There is currently one property in Mission Bay that can be booked for this price. The Dana on Mission Bay is one of the hotels that can be booked for the lowest price in Mission Bay. Price data was last updated on 25 July 2025
Currently, these are the lowest-priced hotels in Mission Bay we've come across for the dates selected. As prices can vary by date, change the dates if you're flexible to compare rates.
1710 West Mission Bay Drive, San Diego, CA, United States
9.4 km from city centre
€158
Avg. per night
1441 Quivira Road, San Diego, CA, United States
9.6 km from city centre
Free Wi-Fi
€205
Avg. per night
998 West Mission Bay Drive, San Diego, CA, United States
10.5 km from city centre
Free Wi-Fi
Parking
€216
Avg. per night
1775 East Mission Bay Drive, San Diego, CA, United States
8.6 km from city centre
Free Wi-Fi
€233
Avg. per night
3999 Mission Boulevard, San Diego, CA, United States
12.2 km from city centre
Free Wi-Fi
€234
Avg. per night
1404 Vacation Road, San Diego, CA, United States
10.1 km from city centre
€236
Avg. per night
707 Pacific Beach Drive, San Diego, CA, United States
12.3 km from city centre
Free Wi-Fi
€254
Avg. per night

Hotel prices in Mission Bay

Get a sense of the average price and most popular properties to stay in Mission Bay to help you budget for your trip accordingly. Hotels that are booked the most in each class receive the “Most popular” badge. Hotels with the “Best value” badge are the most popular hotels in Mission Bay at attractive prices. Price data was last updated on 25 July 2025.
We've come across the following hotels in Mission Bay with different price and hotel class options. You'll also find the most popular and best value properties within each hotel class.
4 stars +
1404 Vacation Road, San Diego, CA, United States
€236
3999 Mission Boulevard, San Diego, CA, United States
€234
707 Pacific Beach Drive, San Diego, CA, United States
€254
3 stars
998 West Mission Bay Drive, San Diego, CA, United States
€216
1710 West Mission Bay Drive, San Diego, CA, United States
€158

Where to stay in Mission Bay

Explore different neighbourhoods and areas within Mission Bay to find the perfect location for your stay. Map data was last updated on 25 July 2025.
Use the map to find hotels in Mission Bay that are close to the points of interest you'll be frequenting. More information on a given hotel can be accessed by clicking the hotel's name within the map.

Facts about staying in Mission Bay, San Diego

Find useful tips and insights about staying in Mission Bay to help you make the most of your experience. FAQs were last updated on 25 July 2025.
  • What are the best hotels in Mission Bay?

    San Diego Mission Bay Resort, rated with a score of 7.7 from 419 reviewers, is one of the most popular hotels in Mission Bay. Other top stays include Bahia Resort Hotel, with an average rating of 8.2 from 1,503 reviewers, and The Wayfarer San Diego, with a score of 8.7 from 1,679 reviewers.

  • What is a good hotel near San Diego Convention Center?

    Horton Grand Hotel is a popular hotel near San Diego Convention Center that is highly recommended, with a score of 8.4 across 2,777 reviews.

  • What is a good hotel in Mission Bay near Hotel Circle?

    For a good hotel near to Hotel Circle, consider Days Inn by Wyndham San Diego Hotel Circle - it is rated 7.5/10 from 4,791 HotelsCombined reviews.

  • Is there a good hotel near Mission Beach?

    If you’re planning to stay near Mission Beach, you should consider Paradise Point Resort & Spa, which has a score of 8.2 from 1,871 reviews.

  • How much is a cheap hotel in Mission Bay?

    HotelsCombined users have found cheap hotels in Mission Bay starting from €121 per night in the last 3 days.

  • What are the most popular landmarks to visit in Mission Bay?

    The most popular landmarks in Mission Bay are San Diego Convention Center (in San Diego), Hotel Circle (in San Diego), and Mission Beach (in San Diego) according to our user data. If you plan to visit any of these, we recommend finding a hotel nearby to cut down on travel time.

See more FAQs

Find better results for your stay in Mission Bay

Consider these popular 3-star hotels in Mission Bay

Stay at one of these Mission Bay 3-star hotels that users have found on HotelsCombined.

Search cheap hotels with HotelsCombined. Use the hotel finder to search for the cheapest hotel deal for all major destinations around the world. HotelsCombined searches hundreds of hotel booking sites to help you find hotels and book hotels that suit you best. Since HotelsCombined searches many hotel sites at once, you can find discount hotels quickly. Discover hotel discounts now and make your hotel reservation today.